CDS

Accession Number TCMCG006C112505
gbkey CDS
Protein Id XP_013652622.1
Location join(10541972..10542075,10542160..10542304,10542568..10542642,10542767..10542856,10542948..10543027,10543121..10543190,10543279..10543364,10543470..10543539,10543639..10543734,10543824..10543929,10544024..10544070,10544168..10544251,10544370..10544423,10544519..10544635,10544789..10544878,10545017..10545088,10545170..10545268,10545351..10545437,10545518..10545571,10545668..10545744,10545868..10546012)
Gene LOC106357504
GeneID 106357504
Organism Brassica napus

Protein

Length 615aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013797168.2
Definition probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category A
Description RNA helicase
KEGG_TC -
KEGG_Module M00355        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13117        [VIEW IN KEGG]
EC 3.6.4.13        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003724        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004004        [VIEW IN EMBL-EBI]
GO:0004386        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005681        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008026        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008186        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016462        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016817        [VIEW IN EMBL-EBI]
GO:0016818        [VIEW IN EMBL-EBI]
GO:0016887        [VIEW IN EMBL-EBI]
GO:0017111        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0042623        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0070035        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGTTTTGGAAGCCAGGAACGGAGAAGCCAAGCTTCGTCGAGGATGAAGAAGGAGGCATAGTGCTCATGTCCAACAATCTCTCATCCTCTTCTTCTTCTAGTTTTGGGTATGCGAATATAGAGAAGCAGAGGCAGAGATTGCCAGTGTACAAGTACAGGACTGAGATTCTGTATCTGGTGGAGAATCACGCTACCACCATCATCGTTGGTGAGACGGGAAGTGGCAAAACCACCCAGATTCCTCAGTATCTTAAAGAAGCTGGATGGGCTGAAGGAGGTCGAGTTATTGCTTGCACACAGCCAAGGCGTTTAGCTGTCCAGTCGGTGTCTGCGAGGGTGGCAGACGAGATTGGGGTGAAACTTGGGGATGAAGTTGGCTACACTATTCGATTTGAAGATCATACAACTTCAGGTGTGACTAGTGTGAAATTTCTCACTGATGGAGTACTTATCCGAGAGATGATGGAGGATCCTCTCTTGACAAAGTATAGTGTTATTATGGTAGATGAAGCTCATGAAAGATCTATTTCAACCGACATTTTACTAGGACTCTTAAAAAAGATACAACGTCGTCGTCCTGAGCTGCGTCTTATTATCTCGTCAGCCACAATCGAAGCAAAAGCAATGTTCAATTTCTTCAATACCAGTAAAAAACGCCAAGCGCCAGAAGGTAGTGCCCAAGGACCAAACTTGGAACCTGCAATCTTATCTGTCGAGGGCAGAGGCTTCAGTGTAAAAATTCACTATGTTGAGGAGCCTGTTTCAGATTATATTAGATCGGTTGTTTCAACGATTTTGTTGATTAACGAACGGGAGCCACCTGGGGATGTTCTTGTATTTCTGACAGGTCAAGATGATATTGAAACTACTATTAAACTTCTTGCAGAAGAAGCTCATAGCAATCAAAAGAATTCTTCAGGACTGCTCCCTCTGCCACTATATTCAGGACTTTCACGAACAGAACAGGAACTGATCTTTACTCCTACTCCCAGAGGAAAAAGAAAAGTTATACTCTCAACAAATATTGCCGAAACATCTTTGACTCTGGAGGGAGTTGTCTATGTGATTGATAGTGGTTTCTCAAAGCAGAAATTCTATAACCCGATTTCAGATATCGAAAGTCTTGTGGTGGCACCAATATCCAAAGCATCTGCTAGACAAAGGTCTGGTAGGGCTGGGCGAGTTCGGCCTGGAAAGTGTTACAGGTACATTCATGTTCTTGACCCAATGATATCAAAAATGATCTTAGCTTCAAATGAGCTTGGTTGTTCAGATGAGATCATTACAATCGCTGCAGTTCTGTCTATCCAATCTGTTTGGGTCATTGCCAGGGGAGTACAGAAAGAACAAGATGAAGCAAAACTGAGATTTGCTGCTGCAGAGGGTGACCATGTCACATTTTTGAATGTATACAAAGGGTTCCTTGAGTCGAAAAAGTCTTCACAGTGGTGCTACAAGAATTTCCTCAACTATCAATCCATGAAGAAAGTGGTTGAAATCAGGGATCAACTCAAACGGATTGCTCGGAGATTAGGCATCACCCTGAAATCATGTGAAGGAGACATAGATGCTGTGAGAAAAGCAGTGACTGCAGGGTTTTTCGCCAATGCATGCCGCTTAGAACCACACAGCAATGGAGTATTCAAGACCATTAGAGGCTCTGAAGAAGTTTATATCCACCCATCGTCCGTATTGTTCAGGGTGAATCCGAAATGGGTGGTTTACCAGTCCATTGTCTCAACAGAGCGTCAATACATGCGGAATGTCGTCACCATCAATCCTTCTTGGCTGACAGAAGCTGCTCCACACTTTTACCAGAACCGCCAAAACAATATCTCCTTGTAA
Protein:  
MAFWKPGTEKPSFVEDEEGGIVLMSNNLSSSSSSSFGYANIEKQRQRLPVYKYRTEILYLVENHATTIIVGETGSGKTTQIPQYLKEAGWAEGGRVIACTQPRRLAVQSVSARVADEIGVKLGDEVGYTIRFEDHTTSGVTSVKFLTDGVLIREMMEDPLLTKYSVIMVDEAHERSISTDILLGLLKKIQRRRPELRLIISSATIEAKAMFNFFNTSKKRQAPEGSAQGPNLEPAILSVEGRGFSVKIHYVEEPVSDYIRSVVSTILLINEREPPGDVLVFLTGQDDIETTIKLLAEEAHSNQKNSSGLLPLPLYSGLSRTEQELIFTPTPRGKRKVILSTNIAETSLTLEGVVYVIDSGFSKQKFYNPISDIESLVVAPISKASARQRSGRAGRVRPGKCYRYIHVLDPMISKMILASNELGCSDEIITIAAVLSIQSVWVIARGVQKEQDEAKLRFAAAEGDHVTFLNVYKGFLESKKSSQWCYKNFLNYQSMKKVVEIRDQLKRIARRLGITLKSCEGDIDAVRKAVTAGFFANACRLEPHSNGVFKTIRGSEEVYIHPSSVLFRVNPKWVVYQSIVSTERQYMRNVVTINPSWLTEAAPHFYQNRQNNISL